BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034H11LP1|AL429973
(861 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig574 992 0.0
3x_Contig1635 384 e-106
>3x_Contig574
Length = 2771
Score = 992 bits (499), Expect = 0.0
Identities = 504/506 (99%)
Strand = Plus / Minus
Query: 1 gatcattaaaaggcgtncggcaatttttaatattggaaactcaaagtataattttcaata 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gatcattaaaaggcgtccggcaatttttaatattggaaactcaaagtataattttcaata 488
Query: 61 tatataaaagtaacactacgaagaacctgttccataattgcagcataatcaaatgaactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tatataaaagtaacactacgaagaacctgttccataattgcagcataatcaaatgaactg 428
Query: 121 agaaatgaataccgcttttatagacgccagccaatacaagtatgttattacacatattct 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 427 agaaatgaataccgcttttatagacgccagccaatacaagtatgtaattacacatattct 368
Query: 181 atttttaaatgatcatgcaaccgttcagggctggacaaaatgaactgaagttcacatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 atttttaaatgatcatgcaaccgttcagggctggacaaaatgaactgaagttcacatatt 308
Query: 241 ctaaatgggagtttgatgagggcaaaagaactctttgggattttagtttgctttgaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ctaaatgggagtttgatgagggcaaaagaactctttgggattttagtttgctttgaagaa 248
Query: 301 ataaaagcatgttaacatcagtagatctttttcttctcgtcaattgacaattgaccagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ataaaagcatgttaacatcagtagatctttttcttctcgtcaattgacaattgaccagca 188
Query: 361 ccagtgttgccaatcaacaataaacctccaatgatacttaagttttgatagaattcgtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ccagtgttgccaatcaacaataaacctccaatgatacttaagttttgatagaattcgtat 128
Query: 421 ttcaagaaatctcttttgctagacccatagaaccaatagttgttgacggtaatgttatag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 ttcaagaaatctcttttgctagacccatagaaccaatagttgttgacggtaatgttatag 68
Query: 481 aacgctagaatcaaacctaaacttat 506
||||||||||||||||||||||||||
Sbjct: 67 aacgctagaatcaaacctaaacttat 42
>3x_Contig1635
Length = 12349
Score = 384 bits (193), Expect = e-106
Identities = 196/199 (98%)
Strand = Plus / Minus
Query: 663 cttactgtctaattcaggkagcataccaaaggtcatcctgttggtaacaatactgtcacc 722
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 12349 cttactgtctaattcaggtagcataccaaaggtcatcctgttggtaacaatactgtcacc 12290
Query: 723 aaatgctatcaataaacccccaatgacacwaatgtttctcaagacaaaagatgatccggt 782
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 12289 aaatgctatcaataaacccccaatgacactaatgtttctcaagacaaaagatgatccggt 12230
Query: 783 gaacagaccgtaaaccaaaccttgtwaaatgacggtacaaatcaatgcactggtggcata 842
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 12229 gaacagaccgtaaaccaaaccttgtaaaatgacggtacaaatcaatgcactggtggcata 12170
Query: 843 cacggtttgtttcctcaag 861
|||||||||||||||||||
Sbjct: 12169 cacggtttgtttcctcaag 12151
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7571
Number of Sequences: 1807
Number of extensions: 7571
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 2
length of query: 861
length of database: 10,358,551
effective HSP length: 16
effective length of query: 845
effective length of database: 10,329,639
effective search space: 8728544955
effective search space used: 8728544955
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)